ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5HFD2_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5HFD2_nD2

Q5HFD2_nD2

UID: 004572494

AlphaFold

Range: 326-420
AlphaFold: AF-Q5HFD2
UniProt: Q5HFD2 (all domains)
Gene: hisS

Protein: Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS)

3D Structure

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Related Domains

Browse other domains in HGTP_anticodon →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAnticodon-binding domain of Class II aaRS(7502)

HH-groupAnticodon-binding domain of Class II aaRS(7502.1)

TT-groupAnticodon-binding domain of Class II aaRS(7502.1.1)

FFamilyHGTP_anticodon(7502.1.1.1)

Pfam Families

PF03129HGTP_anticodon

Anticodon binding domain

ClanCL0458IIaaRS-ABD

External Links

AlphaFold DB: Q5HFD2 UniProt: Q5HFD2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 326-420