ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54HG9_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54HG9_nD3

Q54HG9_nD3

UID: 004576421

AlphaFold

Range: 426-560
AlphaFold: AF-Q54HG9
UniProt: Q54HG9 (all domains)
Gene: swp1

Protein: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1 (Oligosaccharyl transferase subunit swp1) (Ribophorin II) (RPN-II) (Ribophorin-2)

3D Structure

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Related Domains

Browse other domains in Ribophorin_II_3rd →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyRibophorin_II_3rd(11.1.1.652)

Pfam Families

PF23860Ribophorin_II_3rd

Ribophorin II third domain

ClanCL0159E-set

External Links

AlphaFold DB: Q54HG9 UniProt: Q54HG9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 426-560