ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B1J1F5_nD1 - ECOD Domain | ECOD

ECOD/Domains/B1J1F5_nD1

B1J1F5_nD1

UID: 004578925

AlphaFold

Range: 6-55
AlphaFold: AF-B1J1F5
UniProt: B1J1F5 (all domains)
Gene: rapA

Protein: RNA polymerase-associated protein RapA (EC 3.6.4.-)

3D Structure

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Related Domains

Browse other domains in Tudor_1_RapA →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_1_RapA(4.1.1.112)

Pfam Families

PF18339Tudor_1_RapA

RapA N-terminal Tudor like domain 1

ClanCL0010SH3

External Links

AlphaFold DB: B1J1F5 UniProt: B1J1F5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-55