ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q5PDF0_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5PDF0_nD4

Q5PDF0_nD4

UID: 004579257

AlphaFold

Range: 696-968
AlphaFold: AF-Q5PDF0
UniProt: Q5PDF0 (all domains)
Gene: rapA

Protein: RNA polymerase-associated protein RapA (EC 3.6.4.-)

3D Structure

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Related Domains

Browse other domains in RapA_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRapA C-terminal domain(3509)

HH-groupRapA C-terminal domain(3509.1)

TT-groupRapA C-terminal domain(3509.1.1)

FFamilyRapA_C(3509.1.1.1)

Pfam Families

RNA polymerase recycling family C-terminal

External Links

AlphaFold DB: Q5PDF0 UniProt: Q5PDF0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 696-968