ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5SHA1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5SHA1_nD1

Q5SHA1_nD1

UID: 004580356

AlphaFold

Range: 1-135
AlphaFold: AF-Q5SHA1
UniProt: Q5SHA1 (all domains)
Gene: TTHA1829

Protein: Putative pre-16S rRNA nuclease (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RuvX →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRuvX(2484.1.1.40)

Pfam Families

Holliday junction resolvase

ClanCL0580YqgF

External Links

AlphaFold DB: Q5SHA1 UniProt: Q5SHA1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-135