ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5SKS1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5SKS1_nD1

Q5SKS1_nD1

UID: 004580369

AlphaFold

Range: 111-180
AlphaFold: AF-Q5SKS1
UniProt: Q5SKS1 (all domains)

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949)

HH-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949.1)

TT-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949.1.1)

FFamilyIPPT(3949.1.1.1)

Pfam Families

IPP transferase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5SKS1 UniProt: Q5SKS1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-180