ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q4JV56_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q4JV56_nD3

Q4JV56_nD3

UID: 004587254

AlphaFold

Range: 246-305
AlphaFold: AF-Q4JV56
UniProt: Q4JV56 (all domains)

3D Structure

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Related Domains

Browse other domains in TruB_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyTruB_C(1.1.9.10)

Pfam Families

tRNA Pseudouridine synthase II, C terminal

ClanCL0178PUA

External Links

AlphaFold DB: Q4JV56 UniProt: Q4JV56

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-305