ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1xb4C1 - ECOD Domain | ECOD

ECOD/Domains/e1xb4C1

e1xb4C1

UID: 000046005

PDB

Range: C:3-125
PDB: 1XB4 chain C(all domains)
UniProt: P47142 (all domains)
Gene: VPS25

Molecule: Vacuolar protein-sorting-associated protein 25 (ESCRT-II complex subunit VPS25)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ESCRT-II →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyESCRT-II(101.1.2.77)

Pfam Families

PF05871ESCRT-II

ESCRT-II complex subunit

ClanCL0123HTH

External Links

ECOD PDB View: 1XB4 RCSB PDB: 1XB4 PDBe: 1XB4 UniProt: P47142

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure