ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9KS45_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9KS45_nD5

Q9KS45_nD5

UID: 004603554

AlphaFold

Range: 371-460
AlphaFold: AF-Q9KS45
UniProt: Q9KS45 (all domains)
Gene: vgrG1

Protein: Actin cross-linking toxin VgrG1 (EC 6.3.2.-)

3D Structure

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Related Domains

Browse other domains in Phage_base_V →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupTail-associated lysozyme gp5-N(2.7)

TT-groupTail-associated lysozyme gp5-N(2.7.1)

FFamilyPhage_base_V(2.7.1.1)

Pfam Families

PF04717Phage_base_V

Type VI secretion system/phage-baseplate injector OB domain

ClanCL0021OB

External Links

AlphaFold DB: Q9KS45 UniProt: Q9KS45

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 371-460