ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q088H8_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q088H8_nD1

Q088H8_nD1

UID: 004612840

AlphaFold

Range: 6-250
AlphaFold: AF-Q088H8
UniProt: Q088H8 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ubie_methyltran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyUbie_methyltran(2003.1.5.8)

Pfam Families

PF01209Ubie_methyltran

ubiE/COQ5 methyltransferase family

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q088H8 UniProt: Q088H8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-250