ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5XDK8_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5XDK8_nD3

Q5XDK8_nD3

UID: 004613046

AlphaFold

Range: 551-665
AlphaFold: AF-Q5XDK8
UniProt: Q5XDK8 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_bind →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilytRNA_bind(2.1.1.16)

Pfam Families

PF01588tRNA_bind

Putative tRNA binding domain

ClanCL0021OB

External Links

AlphaFold DB: Q5XDK8 UniProt: Q5XDK8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 551-665