ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B1LFZ3_nD3 - ECOD Domain | ECOD

ECOD/Domains/B1LFZ3_nD3

B1LFZ3_nD3

UID: 004619174

AlphaFold

Range: 121-425
AlphaFold: AF-B1LFZ3
UniProt: B1LFZ3 (all domains)
Gene: rapA

Protein: RNA polymerase-associated protein RapA (EC 3.6.4.-)

3D Structure

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Related Domains

Browse other domains in SNF2-rel_dom →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySNF2-rel_dom(2004.1.1.23)

Pfam Families

PF00176SNF2-rel_dom

SNF2-related domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: B1LFZ3 UniProt: B1LFZ3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-425