ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8KBD3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8KBD3_nD1

Q8KBD3_nD1

UID: 004621607

AlphaFold

Range: 6-200
AlphaFold: AF-Q8KBD3
UniProt: Q8KBD3 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_Me_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA_Me_trans(2005.1.1.23)

Pfam Families

PF03054tRNA_Me_trans

tRNA methyl transferase HUP domain

ClanCL0039HUP

External Links

AlphaFold DB: Q8KBD3 UniProt: Q8KBD3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-200