ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O32036_nD1 - ECOD Domain | ECOD

ECOD/Domains/O32036_nD1

O32036_nD1

UID: 004622334

AlphaFold

Range: 1-215
AlphaFold: AF-O32036
UniProt: O32036 (all domains)
Gene: trmR

Protein: tRNA 5-hydroxyuridine methyltransferase (EC 2.1.1.-) (ho5U methyltransferase)

3D Structure

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Related Domains

Browse other domains in Methyltransf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_3(2003.1.5.14)

Pfam Families

PF01596Methyltransf_3

O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: O32036 UniProt: O32036

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-215