ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9ZDF8_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9ZDF8_nD2

Q9ZDF8_nD2

UID: 004623173

AlphaFold

Range: 281-525
AlphaFold: AF-Q9ZDF8
UniProt: Q9ZDF8 (all domains)
Gene: lysS

Protein: Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1f →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupAn anticodon-binding domain of class I aminoacyl-tRNA synthetases(101.8)

TT-groupAn anticodon-binding domain of class I aminoacyl-tRNA synthetases(101.8.1)

FFamilytRNA-synt_1f(101.8.1.4)

Pfam Families

PF01921tRNA-synt_1f

tRNA synthetases class I (K)

ClanCL0039HUP

External Links

AlphaFold DB: Q9ZDF8 UniProt: Q9ZDF8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 281-525