ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A2RIX0_nD1 - ECOD Domain | ECOD

ECOD/Domains/A2RIX0_nD1

A2RIX0_nD1

UID: 004627219

AlphaFold

Range: 1-105
AlphaFold: AF-A2RIX0
UniProt: A2RIX0 (all domains)
Gene: hpf

Protein: Ribosome hibernation promotion factor (HPF) (Lactococcus lactis hibernation promotion factor) (LIHPF)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S30AE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupRibosome binding protein Y (YfiA homologue)(330.2)

TT-groupRibosome binding protein Y (YfiA homologue)(330.2.1)

FFamilyRibosomal_S30AE(330.2.1.1)

Pfam Families

PF02482Ribosomal_S30AE

Sigma 54 modulation protein / S30EA ribosomal protein

ClanCL0219RNase_H

External Links

AlphaFold DB: A2RIX0 UniProt: A2RIX0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-105