ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q8U1T1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8U1T1_nD1

Q8U1T1_nD1

UID: 004635687

AlphaFold

Range: 81-340
AlphaFold: AF-Q8U1T1
UniProt: Q8U1T1 (all domains)
Gene: cmr6

Protein: CRISPR system Cmr subunit Cmr6 (CRISPR type III-B/RAMP module RAMP protein Cmr6)

3D Structure

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Related Domains

Browse other domains in RAMPs →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCas7-related(304.139)

TT-groupCRISPR-associated protein Cas7/Csa2-related(304.139.1)

FFamilyRAMPs(304.139.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

AlphaFold DB: Q8U1T1 UniProt: Q8U1T1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-340