ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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T0D7A2_nD4 - ECOD Domain | ECOD

ECOD/Domains/T0D7A2_nD4

T0D7A2_nD4

UID: 004636459

AlphaFold

Range: 521-625,806-990
AlphaFold: AF-T0D7A2
UniProt: T0D7A2 (all domains)
Gene: cas12b

Protein: CRISPR-associated endonuclease Cas12b (EC 3.1.-.-) (AacC2c1) (CRISPR-associated endonuclease C2c1)

3D Structure

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Related Domains

Browse other domains in C2c1_RuvC-like →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyC2c1_RuvC-like(2484.1.1.92)

Pfam Families

PF22126C2c1_RuvC-like

C2c1 CRISPR-Cas endonuclease, RuvC-like domain

ClanCL0219RNase_H

External Links

AlphaFold DB: T0D7A2 UniProt: T0D7A2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 521-625,806-990