ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SKD2_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5SKD2_nD3

Q5SKD2_nD3

UID: 004641299

AlphaFold

Range: 296-415
AlphaFold: AF-Q5SKD2
UniProt: Q5SKD2 (all domains)
Gene: aspS1

Protein: Aspartate--tRNA(Asp) ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase 1) (AspRS1) (Discriminating aspartyl-tRNA synthetase) (D-AspRS)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupProkaryotic AspRS, insert domain(329)

HH-groupProkaryotic AspRS, insert domain(329.1)

TT-groupProkaryotic AspRS, insert domain(329.1.1)

FFamilyGAD(329.1.1.1)

Pfam Families

GAD domain

ClanCL0250GAD

External Links

AlphaFold DB: Q5SKD2 UniProt: Q5SKD2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 296-415