ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B5HDJ6_nD1 - ECOD Domain | ECOD

ECOD/Domains/B5HDJ6_nD1

B5HDJ6_nD1

UID: 004647549

AlphaFold

Range: 6-345
AlphaFold: AF-B5HDJ6
UniProt: B5HDJ6 (all domains)
Gene: SSDG_02809

Protein: Selina-4(15),7(11)-diene synthase ((2E,6E)-farnesyl diphosphate cyclizing) (EC 4.2.3.181) (Selinadiene synthase) (SdS) (Terpene synthase) (Type I terpene cyclase)

3D Structure

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Related Domains

Browse other domains in Terpene_syn_C_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTerpene_syn_C_2(141.1.1.8)

Pfam Families

PF19086Terpene_syn_C_2

Terpene synthase family 2, C-terminal metal binding

ClanCL0613Terp_synthase

External Links

AlphaFold DB: B5HDJ6 UniProt: B5HDJ6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-345