ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B2SQQ1_nD5 - ECOD Domain | ECOD

ECOD/Domains/B2SQQ1_nD5

B2SQQ1_nD5

UID: 004647960

AlphaFold

Range: 606-740
AlphaFold: AF-B2SQQ1
UniProt: B2SQQ1 (all domains)
Gene: rpoB

Protein: DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_45 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042)

HH-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042.1)

TT-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042.1.1)

FFamilyRNA_pol_Rpb2_45(4042.1.1.4)

Pfam Families

PF10385RNA_pol_Rpb2_45

RNA polymerase beta subunit external 1 domain

External Links

AlphaFold DB: B2SQQ1 UniProt: B2SQQ1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 606-740