ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q5LSY0_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5LSY0_nD1

Q5LSY0_nD1

UID: 004648259

AlphaFold

Range: 16-190
AlphaFold: AF-Q5LSY0
UniProt: Q5LSY0 (all domains)

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySKI(2004.1.1.60)

Pfam Families

Shikimate kinase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5LSY0 UniProt: Q5LSY0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-190