ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0B7F9_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0B7F9_nD1

A0B7F9_nD1

UID: 004648506

AlphaFold

Range: 1-415
AlphaFold: AF-A0B7F9
UniProt: A0B7F9 (all domains)
Gene: lig

Protein: DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_M+DNA_ligase_A_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupATP-dependent DNA ligase DNA-binding domain(4095)

HH-groupATP-dependent DNA ligase DNA-binding domain(4095.1)

TT-groupATP-dependent DNA ligase DNA-binding domain(4095.1.1)

FFamilyDNA_ligase_A_M+DNA_ligase_A_N(4095.1.1.2)

Pfam Families

PF01068DNA_ligase_A_M

ATP dependent DNA ligase domain

ClanCL0179ATP-grasp

PF04675DNA_ligase_A_N

DNA ligase N terminus

External Links

AlphaFold DB: A0B7F9 UniProt: A0B7F9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-415