ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q08DI8_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q08DI8_nD2

Q08DI8_nD2

UID: 004653063

AlphaFold

Range: 106-155,251-370,576-645
AlphaFold: AF-Q08DI8
UniProt: Q08DI8 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TruD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruD(304.102.1.2)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: Q08DI8 UniProt: Q08DI8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-155,251-370,576-645