ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5PM88_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q5PM88_nD5

Q5PM88_nD5

UID: 004655740

AlphaFold

Range: 621-795
AlphaFold: AF-Q5PM88
UniProt: Q5PM88 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Anticodon_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilyAnticodon_1(140.1.1.5)

Pfam Families

PF08264Anticodon_1

Anticodon-binding domain of tRNA ligase

ClanCL0258DALR

External Links

AlphaFold DB: Q5PM88 UniProt: Q5PM88

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 621-795