ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5VFM2_nD3 - ECOD Domain | ECOD

ECOD/Domains/A5VFM2_nD3

A5VFM2_nD3

UID: 004658138

AlphaFold

Range: 296-370
AlphaFold: AF-A5VFM2
UniProt: A5VFM2 (all domains)
Gene: mnmA

Protein: tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.13)

3D Structure

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Related Domains

Browse other domains in tRNA_Me_trans_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAminomethyltransferase beta-barrel domain(1.1.8)

FFamilytRNA_Me_trans_C(1.1.8.5)

Pfam Families

PF20258tRNA_Me_trans_C

Aminomethyltransferase beta-barrel domain

ClanCL0740GCV_T_C

External Links

AlphaFold DB: A5VFM2 UniProt: A5VFM2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 296-370