ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8CT16_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8CT16_nD2

Q8CT16_nD2

UID: 004660424

AlphaFold

Range: 206-365
AlphaFold: AF-Q8CT16
UniProt: Q8CT16 (all domains)
Gene: rnj1

Protein: Ribonuclease J 1 (RNase J1) (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in RNase_J_b_CASP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRNase_J_b_CASP(2004.1.1.231)

Pfam Families

PF22505RNase_J_b_CASP

Ribonuclease J, beta-CASP domain

External Links

AlphaFold DB: Q8CT16 UniProt: Q8CT16

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 206-365