ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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C4KGX9_nD3 - ECOD Domain | ECOD

ECOD/Domains/C4KGX9_nD3

C4KGX9_nD3

UID: 004661396

AlphaFold

Range: 306-530
AlphaFold: AF-C4KGX9
UniProt: C4KGX9 (all domains)

3D Structure

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Related Domains

Browse other domains in Topo-VIb_trans →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyTopo-VIb_trans(212.1.1.22)

Pfam Families

PF09239Topo-VIb_trans

Topoisomerase VI B subunit, transducer

ClanCL0329S5

External Links

AlphaFold DB: C4KGX9 UniProt: C4KGX9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 306-530