ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5R539_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5R539_nD1

Q5R539_nD1

UID: 004662157

AlphaFold

Range: 411-500
AlphaFold: AF-Q5R539
UniProt: Q5R539 (all domains)

3D Structure

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Related Domains

Browse other domains in RRM_SRRT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_SRRT(304.9.1.78)

Pfam Families

PF28978RRM_SRRT

Serrate RNA effector molecule homolog, RNA-recognition domain

ClanCL0221RRM

External Links

AlphaFold DB: Q5R539 UniProt: Q5R539

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 411-500