ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B3M0F3_nD1 - ECOD Domain | ECOD

ECOD/Domains/B3M0F3_nD1

B3M0F3_nD1

UID: 004663955

AlphaFold

Range: 21-190
AlphaFold: AF-B3M0F3
UniProt: B3M0F3 (all domains)
Gene: slx1

Protein: Structure-specific endonuclease subunit SLX1 homolog (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in GIY-YIG →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyGIY-YIG(821.1.1.1)

Pfam Families

PF01541GIY-YIG

GIY-YIG catalytic domain

ClanCL0418GIY-YIG

External Links

AlphaFold DB: B3M0F3 UniProt: B3M0F3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-190