ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8PVR7_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8PVR7_nD1

Q8PVR7_nD1

UID: 004669775

AlphaFold

Range: 1-100
AlphaFold: AF-Q8PVR7
UniProt: Q8PVR7 (all domains)
Gene: lig1

Protein: DNA ligase 1 (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP] 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_ligase_A_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupATP-dependent DNA ligase DNA-binding domain(4095)

HH-groupATP-dependent DNA ligase DNA-binding domain(4095.1)

TT-groupATP-dependent DNA ligase DNA-binding domain(4095.1.1)

FFamilyDNA_ligase_A_N(4095.1.1.1)

Pfam Families

PF04675DNA_ligase_A_N

DNA ligase N terminus

External Links

AlphaFold DB: Q8PVR7 UniProt: Q8PVR7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-100