ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A1JIF2_nD1 - ECOD Domain | ECOD

ECOD/Domains/A1JIF2_nD1

A1JIF2_nD1

UID: 004672534

AlphaFold

Range: 6-250
AlphaFold: AF-A1JIF2
UniProt: A1JIF2 (all domains)
Gene: ubiE

Protein: Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ubie_methyltran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyUbie_methyltran(2003.1.5.8)

Pfam Families

PF01209Ubie_methyltran

ubiE/COQ5 methyltransferase family

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A1JIF2 UniProt: A1JIF2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-250