ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5NEF9_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5NEF9_nD2

Q5NEF9_nD2

UID: 004676258

AlphaFold

Range: 206-280
AlphaFold: AF-Q5NEF9
UniProt: Q5NEF9 (all domains)
Gene: mnmA

Protein: tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.13)

3D Structure

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Related Domains

Browse other domains in tRNA_Me_trans_M →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupPRC-barrel domain(4.6)

TT-groupPRC-barrel domain(4.6.1)

FFamilytRNA_Me_trans_M(4.6.1.5)

Pfam Families

PF20259tRNA_Me_trans_M

tRNA methyl transferase PRC-barrel domain

ClanCL0350PRC-barrel

External Links

AlphaFold DB: Q5NEF9 UniProt: Q5NEF9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 206-280