ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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O28000_nD1 - ECOD Domain | ECOD

ECOD/Domains/O28000_nD1

O28000_nD1

UID: 004679139

AlphaFold

Range: 6-165
AlphaFold: AF-O28000
UniProt: O28000 (all domains)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S4,S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4,S4(221.1.2.1)

Pfam Families

PF00163Ribosomal_S4

Ribosomal protein S4/S9 N-terminal domain

ClanCL0492S4

S4 domain

ClanCL0492S4

External Links

AlphaFold DB: O28000 UniProt: O28000

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-165