ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lv5A1 - ECOD Domain | ECOD

ECOD/Domains/e1lv5A1

e1lv5A1

UID: 000047533

PDB

Range: A:668-791
PDB: 1LV5 chain A(all domains)
UniProt: P52026 (all domains)
Gene: polA

Molecule: DNA POLYMERASE I

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturealpha arrays(a.6)

XX-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964)

HH-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1)

TT-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1.1)

FFamilyDNA_pol_A(4964.1.1.1)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546within 5 Å only

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 1LV5 RCSB PDB: 1LV5 PDBe: 1LV5 UniProt: P52026

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.