ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nikE1 - ECOD Domain | ECOD

ECOD/Domains/e1nikE1

e1nikE1

UID: 000483148

PDB

Range: E:143-215
PDB: 1NIK chain E(all domains)
UniProt: P20434 (all domains)
Gene: RPB5

Molecule: DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (ABC27) (DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRPB5-like RNA polymerase subunit(840)

HH-groupRPB5-like RNA polymerase subunit(840.1)

TT-groupRPB5-like RNA polymerase subunit(840.1.1)

FFamilyRNA_pol_Rpb5_C(840.1.1.1)

Pfam Families

PF01191RNA_pol_Rpb5_C

RNA polymerase Rpb5, C-terminal domain

External Links

ECOD PDB View: 1NIK RCSB PDB: 1NIK PDBe: 1NIK UniProt: P20434

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