ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8j5qA01 - ECOD Domain | ECOD

ECOD/Domains/e8j5qA01

e8j5qA01

UID: 004855243

PDB

Range: A:132-162,A:186-187,A:195-199,A:207-209,A:230-232,A:276-311,A:313-345,A:347-381,A:386-388,A:415,A:486
PDB: 8J5Q chain A(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 8J5Q RCSB PDB: 8J5Q PDBe: 8J5Q

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure