ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8qwdA03 - ECOD Domain | ECOD

ECOD/Domains/e8qwdA03

e8qwdA03

UID: 004863118

PDB

Range: A:313-331,A:336-337,A:340-407,A:412-418,A:423-447,A:454-464,A:477-489,A:495-505,A:512-563
PDB: 8QWD chain A(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in cas_Cpf1_2nd →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071)

HH-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1)

TT-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1.1)

FFamilycas_Cpf1_2nd(1071.1.1.1)

Pfam Families

PF21918cas_Cpf1_2nd

CRISPR-associated endonuclease Cpf1 REC2 domain

External Links

ECOD PDB View: 8QWD RCSB PDB: 8QWD PDBe: 8QWD

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure