ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A060HBV1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A060HBV1_F1_nD1

A0A060HBV1_F1_nD1

UID: 004926794

AlphaFold

Range: 71-155
AlphaFold: AF-A0A060HBV1
UniProt: A0A060HBV1 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Spt5-NGN →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupN-utilization substance G protein NusG, N-terminal domain(304.17)

TT-groupN-utilization substance G protein NusG, N-terminal domain(304.17.1)

FFamilySpt5-NGN(304.17.1.2)

Pfam Families

PF03439Spt5-NGN

Early transcription elongation factor of RNA pol II, NGN section

ClanCL0439NusG-like

External Links

AlphaFold DB: A0A060HBV1 UniProt: A0A060HBV1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-155