ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1Y3GD28_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1Y3GD28_F1_nD3

A0A1Y3GD28_F1_nD3

UID: 004931224

AlphaFold

Range: 226-440
AlphaFold: AF-A0A1Y3GD28
UniProt: A0A1Y3GD28 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_ligase_A_M →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyDNA_ligase_A_M(206.1.3.1)

Pfam Families

PF01068DNA_ligase_A_M

ATP dependent DNA ligase domain

ClanCL0179ATP-grasp

External Links

AlphaFold DB: A0A1Y3GD28 UniProt: A0A1Y3GD28

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 226-440