ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A7C0X3K4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A7C0X3K4_F1_nD2

A0A7C0X3K4_F1_nD2

UID: 004938975

AlphaFold

Range: 1-40,156-165,216-264
AlphaFold: AF-A0A7C0X3K4
UniProt: A0A7C0X3K4 (all domains)
Gene: rpo3

Protein: DNA-directed RNA polymerase subunit Rpo3 (EC 2.7.7.6) (DNA-directed RNA polymerase subunit D)

3D Structure

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Related Domains

Browse other domains in RNA_pol_L →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L(305.1.1.1)

Pfam Families

PF01193RNA_pol_L

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

AlphaFold DB: A0A7C0X3K4 UniProt: A0A7C0X3K4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-40,156-165,216-264