ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A9Y1BJF6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A9Y1BJF6_F1_nD1

A0A9Y1BJF6_F1_nD1

UID: 004943522

AlphaFold

Range: 11-230
AlphaFold: AF-A0A9Y1BJF6
UniProt: A0A9Y1BJF6 (all domains)
Gene: K9W45_10050

Protein: RNA ligase

3D Structure

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Related Domains

Browse other domains in RNA_ligase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyRNA_ligase(206.1.3.23)

Pfam Families

PF09414RNA_ligase

RNA ligase

ClanCL0179ATP-grasp

External Links

AlphaFold DB: A0A9Y1BJF6 UniProt: A0A9Y1BJF6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-230