ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A9Y1BMF5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A9Y1BMF5_F1_nD1

A0A9Y1BMF5_F1_nD1

UID: 004945015

AlphaFold

Range: 11-130
AlphaFold: AF-A0A9Y1BMF5
UniProt: A0A9Y1BMF5 (all domains)
Gene: K9W45_04595

Protein: GIY-YIG nuclease family protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in DUF123 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyDUF123(821.1.1.4)

Pfam Families

Domain of unknown function DUF123

ClanCL0418GIY-YIG

External Links

AlphaFold DB: A0A9Y1BMF5 UniProt: A0A9Y1BMF5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-130