ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0AAF0D1Q7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0AAF0D1Q7_F1_nD1

A0AAF0D1Q7_F1_nD1

UID: 004947354

AlphaFold

Range: 1-295
AlphaFold: AF-A0AAF0D1Q7
UniProt: A0AAF0D1Q7 (all domains)
Gene: ligD

Protein: Non-homologous end-joining DNA ligase (EC 6.5.1.1)

3D Structure

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Related Domains

Browse other domains in LigD_Prim-Pol →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupPrim-pol domain(862)

HH-groupPrim-pol domain(862.1)

TT-groupPrim-pol domain(862.1.1)

FFamilyLigD_Prim-Pol(862.1.1.5)

Pfam Families

PF21686LigD_Prim-Pol

LigD, primase-polymerase domain

ClanCL0243AEP

External Links

AlphaFold DB: A0AAF0D1Q7 UniProt: A0AAF0D1Q7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-295