ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0AAF0D1T3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0AAF0D1T3_F1_nD2

A0AAF0D1T3_F1_nD2

UID: 004947393

AlphaFold

Range: 216-330
AlphaFold: AF-A0AAF0D1T3
UniProt: A0AAF0D1T3 (all domains)
Gene: ligD

Protein: Non-homologous end-joining DNA ligase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_ligase_A_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_A_C(2.1.1.31)

Pfam Families

PF04679DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

ClanCL0021OB

External Links

AlphaFold DB: A0AAF0D1T3 UniProt: A0AAF0D1T3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 216-330