ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0AAF0D3J7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0AAF0D3J7_F1_nD2

A0AAF0D3J7_F1_nD2

UID: 004948252

AlphaFold

Range: 111-320
AlphaFold: AF-A0AAF0D3J7
UniProt: A0AAF0D3J7 (all domains)
Gene: OdinLCB4_003690

Protein: Topoisomerase 6 subunit A/Spo11 TOPRIM domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in TOP6A-Spo11_Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyTOP6A-Spo11_Toprim(2006.1.3.11)

Pfam Families

PF21180TOP6A-Spo11_Toprim

Topoisomerase 6 subunit A/Spo11, Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: A0AAF0D3J7 UniProt: A0AAF0D3J7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-320