ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0AAF0D3M6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0AAF0D3M6_F1_nD1

A0AAF0D3M6_F1_nD1

UID: 004948284

AlphaFold

Range: 6-175
AlphaFold: AF-A0AAF0D3M6
UniProt: A0AAF0D3M6 (all domains)
Gene: OdinLCB4_003790

Protein: 16S rRNA aminocarboxypropyltransferase (EC 2.5.1.157)

3D Structure

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Related Domains

Browse other domains in Ribo_biogen_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyRibo_biogen_C(2488.1.1.9)

Pfam Families

PF04034Ribo_biogen_C

Ribosome biogenesis protein, C-terminal

ClanCL0098SPOUT

External Links

AlphaFold DB: A0AAF0D3M6 UniProt: A0AAF0D3M6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-175