ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0AAF0D3Q6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0AAF0D3Q6_F1_nD2

A0AAF0D3Q6_F1_nD2

UID: 004948300

AlphaFold

Range: 151-238,253-450
AlphaFold: AF-A0AAF0D3Q6
UniProt: A0AAF0D3Q6 (all domains)
Gene: OdinLCB4_003545

Protein: PINc/VapC family ATPase

3D Structure

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Related Domains

Browse other domains in T2SSE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyT2SSE(2004.1.1.42)

Pfam Families

Type II/IV secretion system protein

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0AAF0D3Q6 UniProt: A0AAF0D3Q6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 151-238,253-450