ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0AAF0IAN8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0AAF0IAN8_F1_nD1

A0AAF0IAN8_F1_nD1

UID: 004948405

RepresentativeAlphaFold

Range: 6-63,91-165,226-260
AlphaFold: AF-A0AAF0IAN8
UniProt: A0AAF0IAN8 (all domains)
Gene: rpo3

Protein: DNA-directed RNA polymerase subunit Rpo3 (EC 2.7.7.6) (DNA-directed RNA polymerase subunit D)

3D Structure

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Related Domains

Browse other domains in RNA_pol_L →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRibosomal protein TL5/L25 C-terminal domain-like(240)

HH-groupInsert subdomain of RNA polymerase alpha subunit(240.2)

TT-groupInsert subdomain of RNA polymerase alpha subunit(240.2.1)

FFamilyRNA_pol_L(240.2.1.4)

Pfam Families

PF01193RNA_pol_L

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

AlphaFold DB: A0AAF0IAN8 UniProt: A0AAF0IAN8

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-63,91-165,226-260