ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A5UJS1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A5UJS1_F1_nD3

A5UJS1_F1_nD3

UID: 004952514

AlphaFold

Range: 161-233
AlphaFold: AF-A5UJS1
UniProt: A5UJS1 (all domains)
Gene: Msm_0244

Protein: Ribosome maturation protein SDO1 homolog

3D Structure

Loading viewer...

Related Domains

Browse other domains in SBDS_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilySBDS_C(304.24.1.6)

Pfam Families

SBDS protein, C-terminal domain

ClanCL0437EF-G_C

External Links

AlphaFold DB: A5UJS1 UniProt: A5UJS1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 161-233